TO DO: make a clean function that can clean data based on its type. Blank for now --clean argument should have a flag for the search engine used, e.g. MaxQuant or Protein Discoverer. Version numbers matter as well.

TO DO: make a clean function that can clean data based on its type. Blank for now --clean argument should have a flag for the search engine used, e.g. MaxQuant or Protein Discoverer. Version numbers matter as well.

Usage

clean(experiment = c("SWATH", "TMT"), data, filelist, searchengine, version)

Arguments

filelist